Sequencing Updates:

• Recent Sequencing Updates Report

Illumina (Solexa) Manuals:

• Genome Analyzer Guide
• Sequencing Analysis Software Guide (Pipeline v1.4)

Illumina (Solexa) Protocols:

• ClusterStation Reagent Prep
• GenomeAnalyzer Reagent Prep
• ClusterStation / GenomeAnalyzer Site Prep
• DGE-Tag Sample Prep
• Genomic DNA Sample Prep
• Small RNA Sample Prep
• User Provided Sample Prep Materials

Reference Sequences:

• Illumina released Oligo (Adapters / Primers)
• Enterobacteria phage phiX174 (Control)

Illumina (Solexa) FAQ's:

• Gene Expression FAQ
• Small RNA FAQ

IT Requirements:

• Analysis Pipeline IT Requirements

Data Management References:

• DNA Data Deluge
• Managing Next-Gen Sequencing Data

IMDSC Presentation:

• Institute of Molecular Design Sequencing Center