People
Grants
Publications
Student Awards
Contact Information
Grants And Contracts
  • Federal

    • Tools for Ultraspecific Probe/Primer Design (Phase 2)
       Source of Support: Homeland Security Advanced Research Projects Agency
      PI: Y. Fofanov (UH)
      Co-PIs: G. Fox (UH), R. Willson (UH)
      Duration: 4/15/07 - 4/15/09
    • Bioinformatics Approach and Assay Development for the Estimation of the Total Genomic Diversity of Complex Backgrounds (Phase 1)
       Source of Support: Homeland Security Advanced Research Projects Agency
      PI: Y. Fofanov (UH)
      Co-PIs: M. Travisano (UH), R. Willson (UH)
      Duration: 4/15/07 - 4/15/08
    • SBIR: Population-Scale HLA Typing for Homeland Defense (Phase 2)
       Source of Support: National Institutes of Health
      UH PI: Yuriy Fofanov
      PI: Rahul Mitra (Genomics USA, Inc.)
      Genomics USA / Univ. of Arizona PI: Mike Hogan
      Duration: 07/01/06 - 07/31/09
    • Rapid, Easy Nucleic Acid-Based Detection of Pulmonary Tuberculosis
       Source of Support: National Institutes of Health
      UH PI: Yuriy Fofanov
      PI: H. Koshinsky (Investigen, Inc.)
      Duration: 07/01/07 - 06/30/08
    • Microorganisms and the Space Sciences
       Source of Support: Institute Space Systems Operations
      Co-PI: Yuriy Fofanov
      PI: G. Fox (UH)
      Duration: 5/1/07 - 8/31/07
    • Tools for Ultraspecific Probe/Primer Design (Supplement)
       Source of Support: Homeland Security Advanced Research Projects Agency
      PI: Y. Fofanov (UH)
      Duration: 7/15/06 - 10/15/06
    • Tools for Ultraspecific Probe/Primer Design (Phase 1)
       Source of Support: Homeland Security Advanced Research Projects Agency
      PI: Y. Fofanov (UH)
      Co-PIs: G. Fox (UH), R. Willson (UH)
      Duration: 5/15/05 - 5/15/06
    • Ultraspecific Sequences for the Detection of Unknown Pathogens in Human Samples (Computer Resource Grant)
       Sponsor: MRAC (Medium Resource Allocations Committee), San Diego Supercomputer Center
      PI: Y. Fofanov (UH)
      Co-PI: Catherine Putonti
      Duration: 01/01/06 - 12/31/06
    • Bioinformatics Curriculum Development
      Source of Support: NIH BISTI (National Institutes of Health Biomedical Information Science and Technology Initiative) Supplement
      PI: Y. Fofanov (UH)
      Duration: 07/01/02 - 06/30/03
    • Grantsmanship Training Program (Travel & Registration award)
       Source of Support: Federation of American Societies for Experimental Biology (FASEB) PI: Y. Fofanov (UH)
      Duration: 11/04/04 - 11/06/04
    • SBIR: Population-Scale HLA Typing for Homeland Defense (Phase 1)
       Source of Support: National Institutes of Health
      UH PI: Yuriy Fofanov
      PI: Rahul Mitra (Genomics USA, Inc.)
      Co PI: Mike Hogan (Univ. of Arizona, Tucson)
      Duration: 04/01/04 - 03/31/05
    • NHLBI Administrative Supplements for Micro-array Application and Analysis
       Source of Support: National Institutes of Health
      Co-PI: Y. Fofanov
      PI: B. Teng (UT Houston)
      Duration: 09/30/02 - 08/31/03

  • Corporate

    • Updating/Annotating UH Bioinformatics Database
       Source of Support: Eureka Genomics Inc.
      Duration: 4/10/08 - 4/9/09
    • Novel Algorithms and Data Structures for New Generation Sequencing NGS Data Analysis
       Source of Support: Eureka Genomics Inc.
      Duration: 4/10/08 - 8/9/08
    • Novel Assay to Detect a Broad Range of Bacterial and Fungal Pathogens
       Source of Support: Eureka Genomics Inc.
      Duration: 4/10/08 - 10/9/08
    • Novel Algorithms and Data Structures for the Identification of Unique Regions in Collections of Genomic Sequences
       Source of Support: Eureka Genomics Inc.
      Duration: 4/10/08 - 10/9/08

  • Local

    • New Approach to Detect the Presence of Foreign DNA in Human Clinical Samples
       Source of Support: Texas Learning and Computation Center
      PI: Y. Fofanov (UH)
      Duration: 06/01/2006 - 08/31/2007
    • Ultrasensitive Probes for the Mutation Accumulation Rate Monitoring
       Source of Support: Texas Learning and Computation Center
      PI: Y. Fofanov (UH)
      Duration: 11/01/04 - 08/31/06
    • Genomic Space Fingerprinting: The Basis of a Universal Biosensor for Identification of Organisms
       Source of Support: Texas Learning and Computation Center
      PI: Y. Fofanov (UH)
      Co-PIs: G. Fox (UH), R. Willson (UH)
      Duration: 12/01/02 - 08/31/03
    • Computational Identification of Riboswitches and Non-Coding RNA
       Source of Support: Texas Learning and Computation Center
      Co-PI: Y. Fofanov
      PI: George Fox (UH)
      Co-PIs: Y. Fofanov (UH), R. Willson (UH)
      Duration: 05/09/2005 - 08/31/2006

  • Student

    • Fellowship for Chen Feng: Genome Fingerprinting
       Source of Support: W. M. Keck Foundation
      PI: Y. Fofanov (UH)
      Co-PI: J. Musser (The Methodist Hospital Research Institute)
      Duration: 04/01/07 - 03/31/08
    • Fellowship for Catherine Putonti: Genome Fingerprinting
       Source of Support: W. M. Keck Foundation
      PI: Y. Fofanov (UH)
      Co-PI: G. Fox (UH)
      Duration: 07/01/03 - 07/01/06
    • Fellowship for Tongbin Li: Development of Methodologies and New Approaches to Analyze Microarray Produced Data
       Source of Support: W. M. Keck Foundation
      PI: Y. Fofanov (UH)
      Co-PI: B. Thompson (UTMB Galveston)
      Duration: 07/01/02 - 06/30/05
State Of Texas - City Of Houston - University Of Houston - U.H., Department Of Computer Science - U.H., Department Of Biology - TLC2